SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1050567	0.86[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs1467354	1.00[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs2100123	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs57444330	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6711692	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72813592	0.86[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs72815544	0.83[AFR][1000 genomes]
rs72815560	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72815573	0.86[AFR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72815582	0.86[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs7559099	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
USP34	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)