SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs13027673	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs17538295	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1821183	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs35183708	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35469992	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs55770917	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs62149378	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs62149379	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6725719	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7590126	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7600065	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
PAPOLG	Proximal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)