SNP Report

Basic Infomation

Name	rs6545766 dbSNP
Location	chr:2,25077856
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 35)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10865315	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11675198	0.83[EUR][1000 genomes]
rs11675457	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11683929	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11686663	0.87[EUR][1000 genomes]
rs11687089	0.98[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11892869	0.93[ASN][1000 genomes]
rs13019149	0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13387729	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13407913	0.93[ASN][1000 genomes]
rs13410999	0.93[ASN][1000 genomes]
rs1529897	0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1541984	0.98[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1865689	0.87[EUR][1000 genomes]
rs2033653	0.90[ASN][1000 genomes]
rs2033654	0.90[ASN][1000 genomes]
rs2033655	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2033656	0.92[ASN][1000 genomes]
rs2384057	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2384058	0.92[ASN][1000 genomes]
rs2384059	0.92[ASN][1000 genomes]
rs2384061	0.82[EUR][1000 genomes]
rs34697209	0.83[EUR][1000 genomes]
rs35177510	0.93[AFR][1000 genomes];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35803386	0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6545776	0.93[ASN][1000 genomes]
rs6725517	0.83[EUR][1000 genomes]
rs7567997	0.93[ASN][1000 genomes]
rs7576788	0.94[ASN][1000 genomes]
rs7580081	0.93[ASN][1000 genomes]
rs7591460	0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7597332	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7605335	0.87[EUR][1000 genomes]
rs7608976	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs916485	0.94[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ADCY3	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)