SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 7)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11071951	1.00[ASW][hapmap];0.96[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];0.89[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.88[YRI][hapmap];0.81[EUR][1000 genomes]
rs11071952	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];0.81[EUR][1000 genomes]
rs17298032	0.81[CHB][hapmap];0.85[CHD][hapmap];1.00[JPT][hapmap]
rs2899724	0.87[ASW][hapmap];0.93[LWK][hapmap]
rs4776924	0.81[ASW][hapmap];0.81[CEU][hapmap]
rs7359257	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap]
rs8026627	0.87[ASW][hapmap];0.90[LWK][hapmap]

rSNP related genes

Symbol	Regulation type
IQCH	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 5)