SNP Report
Basic Infomation
| Name | rs632043 dbSNP |
|---|---|
| Location | chr:6,90997693 |
| Allele | A/G |
LD-proxy of rSNPs(r2>0.8) (count: 17)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11968498 | 1.00[JPT][hapmap] |
| rs11969733 | 1.00[JPT][hapmap] |
| rs206914 | 1.00[EUR][1000 genomes] |
| rs206915 | 1.00[EUR][1000 genomes] |
| rs206917 | 1.00[EUR][1000 genomes] |
| rs206918 | 1.00[EUR][1000 genomes] |
| rs2474613 | 1.00[JPT][hapmap] |
| rs597244 | 1.00[EUR][1000 genomes] |
| rs603498 | 1.00[EUR][1000 genomes] |
| rs633937 | 0.98[AFR][1000 genomes];0.80[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs6454804 | 1.00[JPT][hapmap] |
| rs657569 | 1.00[EUR][1000 genomes] |
| rs662685 | 1.00[EUR][1000 genomes] |
| rs679528 | 1.00[EUR][1000 genomes] |
| rs680137 | 1.00[EUR][1000 genomes] |
| rs6926678 | 1.00[JPT][hapmap] |
| rs6935531 | 1.00[JPT][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| BACH2 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014