SNP Report
Basic Infomation
| Name | rs62139117 dbSNP |
|---|---|
| Location | chr:2,65576415 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 45)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10186240 | 0.99[ASN][1000 genomes] |
| rs10188563 | 0.95[ASN][1000 genomes] |
| rs1039764 | 0.85[ASN][1000 genomes] |
| rs1039767 | 0.85[EUR][1000 genomes] |
| rs11126034 | 0.91[ASN][1000 genomes] |
| rs11126035 | 0.89[ASN][1000 genomes] |
| rs11673956 | 0.89[ASN][1000 genomes] |
| rs11673987 | 0.89[ASN][1000 genomes] |
| rs11684155 | 0.91[ASN][1000 genomes] |
| rs11689314 | 0.88[ASN][1000 genomes] |
| rs11695373 | 0.91[ASN][1000 genomes] |
| rs1194849 | 0.88[ASN][1000 genomes] |
| rs1396210 | 0.99[ASN][1000 genomes] |
| rs174847 | 0.87[ASN][1000 genomes] |
| rs17534670 | 0.85[ASN][1000 genomes] |
| rs1858036 | 0.89[ASN][1000 genomes] |
| rs1858037 | 0.89[ASN][1000 genomes] |
| rs1876518 | 0.88[ASN][1000 genomes] |
| rs198478 | 0.87[ASN][1000 genomes] |
| rs2271198 | 0.89[ASN][1000 genomes] |
| rs2661795 | 0.85[ASN][1000 genomes] |
| rs2661796 | 0.82[ASN][1000 genomes] |
| rs2661797 | 0.86[ASN][1000 genomes] |
| rs2661798 | 0.87[ASN][1000 genomes] |
| rs268122 | 0.90[ASN][1000 genomes] |
| rs268131 | 0.88[ASN][1000 genomes] |
| rs268132 | 0.87[ASN][1000 genomes] |
| rs268136 | 0.88[ASN][1000 genomes] |
| rs268138 | 0.95[ASN][1000 genomes] |
| rs268139 | 0.88[ASN][1000 genomes] |
| rs4289177 | 0.94[ASN][1000 genomes] |
| rs4303705 | 0.86[ASN][1000 genomes] |
| rs4494728 | 0.90[ASN][1000 genomes] |
| rs4549071 | 0.96[ASN][1000 genomes] |
| rs4671127 | 0.83[ASN][1000 genomes] |
| rs6711791 | 0.98[ASN][1000 genomes] |
| rs6738087 | 0.97[ASN][1000 genomes] |
| rs702875 | 0.85[ASN][1000 genomes] |
| rs71398630 | 0.90[ASN][1000 genomes] |
| rs7559283 | 0.99[ASN][1000 genomes] |
| rs7581149 | 0.91[ASN][1000 genomes] |
| rs906577 | 0.89[ASN][1000 genomes] |
| rs906578 | 0.90[ASN][1000 genomes] |
| rs934734 | 0.89[ASN][1000 genomes] |
| rs955903 | 0.91[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| SPRED2 | Proximal transcriptional regulation |
| SPRED2 | Distal transcriptional regulation |
| SPRED2 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014