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rVarBase
SNP Report
Basic Infomation
Name
rs1039767  
dbSNP
Location
chr:2,65557163
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 1)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs62139117
0.85[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
SPRED2
Distal transcriptional regulation
SPRED2
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 14)
eQTL related gene
Source
TRIAP1
SCAN
VDAC3
SCAN
NUP37
SCAN
UBE2N
SCAN
C15orf44
SCAN
GPR135
SCAN
ZNF32
SCAN
XRCC6
SCAN
NKTR
SCAN
F2RL3
SCAN
CSNK1G2
SCAN
B3GAT2
SCAN
TTLL1
SCAN
ARIH2
SCAN