SNP Report

Basic Infomation

Name	rs61820160 dbSNP
Location	chr:1,114183779
Allele	G/T

LD-proxy of rSNPs(r²>0.8) (count: 48)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10858011	0.83[ASN][1000 genomes]
rs11102661	0.86[ASN][1000 genomes]
rs11102669	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1113523	0.81[ASN][1000 genomes]
rs1146182	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1146187	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1217192	0.85[ASN][1000 genomes]
rs1217193	0.86[ASN][1000 genomes]
rs1217199	0.86[ASN][1000 genomes]
rs1217200	0.86[ASN][1000 genomes]
rs1217208	0.83[ASN][1000 genomes]
rs1217210	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1217211	0.83[ASN][1000 genomes]
rs1217214	0.81[ASN][1000 genomes]
rs1217215	0.83[ASN][1000 genomes]
rs1217223	0.83[ASN][1000 genomes]
rs1217226	0.83[ASN][1000 genomes]
rs1217227	0.83[ASN][1000 genomes]
rs1217228	0.81[ASN][1000 genomes]
rs1217230	0.83[ASN][1000 genomes]
rs1217232	0.83[ASN][1000 genomes]
rs1217233	0.83[ASN][1000 genomes]
rs1217234	0.83[ASN][1000 genomes]
rs1217235	0.83[ASN][1000 genomes]
rs1217236	0.83[ASN][1000 genomes]
rs1217237	0.83[ASN][1000 genomes]
rs1228280	0.85[ASN][1000 genomes]
rs1230649	0.82[EUR][1000 genomes]
rs1230655	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1230658	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1230659	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1230663	0.80[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1230671	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1235687	0.81[ASN][1000 genomes]
rs1235688	0.83[ASN][1000 genomes]
rs1237289	0.83[ASN][1000 genomes]
rs12565589	0.85[ASN][1000 genomes]
rs1743605	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1777234	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1777237	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1777238	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1777241	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1936398	0.81[EUR][1000 genomes]
rs2636002	0.81[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2798135	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2798138	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4838997	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6537792	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
MAGI3	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)