SNP Report
| Name | rs61746812   dbSNP |
|---|---|
| Location | chr:11,64677270 |
| Allele | C/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11231897 | 0.88[AFR][1000 genomes] |
| rs11231898 | 0.81[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs11231909 | 1.00[AMR][1000 genomes] |
| rs11231910 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs11231914 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs11231922 | 1.00[AMR][1000 genomes] |
| rs11231924 | 1.00[AMR][1000 genomes] |
| rs12270141 | 1.00[AMR][1000 genomes] |
| rs12272785 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs12274449 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs12277345 | 1.00[AMR][1000 genomes] |
| rs12281031 | 1.00[AMR][1000 genomes] |
| rs12290575 | 1.00[AMR][1000 genomes] |
| rs61741398 | 0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7111659 | 1.00[AMR][1000 genomes] |
| Symbol | Regulation type |
|---|---|
| CDC42BPG | Distal transcriptional regulation |
| EHD1 | Distal transcriptional regulation |
| ENSG00000229719 | Distal transcriptional regulation |
| ATG2A | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014




