SNP Report
Name | rs61691968   dbSNP |
---|---|
Location | chr:5,131721811 |
Allele | G/T/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs11568515 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11568522 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11568523 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs3792874 | 1.00[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs3792875 | 1.00[EUR][1000 genomes] |
rs3792877 | 1.00[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs3792878 | 1.00[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs57808755 | 1.00[ASN][1000 genomes] |
rs59099245 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs59302116 | 1.00[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs60212139 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs60229108 | 1.00[ASN][1000 genomes] |
rs60395913 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs60655352 | 1.00[ASN][1000 genomes] |
rs7705471 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
SLC22A5 | Proximal transcriptional regulation |
ENSG00000233006 | Distal transcriptional regulation |
SLC22A5 | Distal transcriptional regulation |
IRF1 | Distal transcriptional regulation |
C5orf56 | Distal transcriptional regulation |
SLC22A4 | Distal transcriptional regulation |
P4HA2 | Distal transcriptional regulation |
SLC22A5 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014