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rVarBase
SNP Report
Basic Infomation
Name
rs6130784  
dbSNP
Location
chr:20,43857241
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 1)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs6130759
0.81[GIH][hapmap]
rSNP related genes
Symbol
Regulation type
ENSG00000233352
Proximal transcriptional regulation
ENSG00000243995
Proximal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 2)
eQTL related gene
Source
SDC4
SCAN
ZMYND8
SCAN