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rVarBase
SNP Report
Basic Infomation
Name
rs6119945  
dbSNP
Location
chr:20,31329256
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 6)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11167176
0.83[EUR][1000 genomes]
rs11699834
0.80[EUR][1000 genomes]
rs13038397
0.87[EUR][1000 genomes]
rs34255848
0.82[EUR][1000 genomes]
rs6057638
0.83[EUR][1000 genomes]
rs6141803
0.83[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
DNMT3B
Distal transcriptional regulation
COMMD7
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)