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rVarBase
SNP Report
Basic Infomation
Name
rs6074047  
dbSNP
Location
chr:20,44787478
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 9)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs34603854
0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35585191
0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6017746
1.00[CHB][hapmap]
rs6065934
0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6074041
1.00[CHB][hapmap]
rs6074043
0.83[CHD][hapmap]
rs6074044
0.92[CEU][hapmap]
rs6074052
0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8121598
0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 1)
eQTL related gene
Source
LOC100131496
SCAN