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rVarBase
SNP Report
Basic Infomation
Name
rs6057606  
dbSNP
Location
chr:20,31221247
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 3)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs2424930
1.00[TSI][hapmap]
rs6057581
1.00[TSI][hapmap]
rs6058696
1.00[TSI][hapmap]
rSNP related genes
Symbol
Regulation type
MIR17HG
Distal transcriptional regulation
C20orf112
Distal transcriptional regulation
ENSG00000228156
Distal transcriptional regulation
ENSG00000204393
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 1)
eQTL related gene
Source
IMP3
SCAN