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rVarBase
SNP Report
Basic Infomation
Name
rs6032736  
dbSNP
Location
chr:20,44900653
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 3)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs6032683
1.00[GIH][hapmap]
rs6032741
0.82[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs7269859
1.00[GIH][hapmap];0.90[LWK][hapmap];0.83[MKK][hapmap];1.00[TSI][hapmap]
rSNP related genes
Symbol
Regulation type
CDH22
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 1)
eQTL related gene
Source
TRIM25
SCAN