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rVarBase
SNP Report
Basic Infomation
Name
rs6032601  
dbSNP
Location
chr:20,44584954
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 14)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs16990951
0.98[ASN][1000 genomes]
rs3363
0.90[ASN][1000 genomes]
rs3746503
0.98[ASN][1000 genomes]
rs3746508
0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3746509
1.00[ASN][1000 genomes]
rs3746511
1.00[ASN][1000 genomes]
rs3746512
0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6017717
0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6032589
0.86[ASN][1000 genomes]
rs6032597
0.89[ASN][1000 genomes]
rs6032602
1.00[ASN][1000 genomes]
rs6094229
0.91[ASN][1000 genomes]
rs6104404
0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6124759
0.98[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
ZNF335
Distal transcriptional regulation
ZNF335
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)