SNP Report
Basic Infomation
| Name | rs6032429 dbSNP |
|---|---|
| Location | chr:20,44315549 |
| Allele | A/C |
LD-proxy of rSNPs(r2>0.8) (count: 16)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs1118484 | 0.80[EUR][1000 genomes] |
| rs1352261 | 0.80[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs1487312 | 1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes] |
| rs1487318 | 0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs1487324 | 0.80[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs1825776 | 0.80[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs1843817 | 0.80[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs2425717 | 0.81[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs2425718 | 0.81[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs2425720 | 0.80[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs2425721 | 0.80[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs3092769 | 0.80[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs6032409 | 0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes] |
| rs6032430 | 1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6032445 | 0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73114831 | 0.83[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| WFDC10B | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014