SNP Report

Basic Infomation

Name	rs57942521 dbSNP
Location	chr:2,103139849
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 30)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10515921	1.00[ASN][1000 genomes]
rs11465584	1.00[ASN][1000 genomes]
rs11465596	1.00[ASN][1000 genomes]
rs11902044	1.00[ASN][1000 genomes]
rs13405222	1.00[ASN][1000 genomes]
rs1403549	0.89[EUR][1000 genomes]
rs17027327	0.95[EUR][1000 genomes]
rs17027341	0.98[EUR][1000 genomes]
rs17027421	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1880000	0.89[EUR][1000 genomes]
rs2192669	1.00[ASN][1000 genomes]
rs4851624	1.00[ASN][1000 genomes]
rs57540503	0.84[EUR][1000 genomes]
rs59694233	0.91[EUR][1000 genomes]
rs6709719	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6749440	0.89[EUR][1000 genomes]
rs6759588	1.00[ASN][1000 genomes]
rs72993720	0.95[EUR][1000 genomes]
rs72993722	0.95[EUR][1000 genomes]
rs7567133	1.00[ASN][1000 genomes]
rs7571985	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7572284	0.98[EUR][1000 genomes]
rs7575867	0.98[EUR][1000 genomes]
rs7576324	0.97[EUR][1000 genomes]
rs7583683	0.86[EUR][1000 genomes]
rs7587856	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7593444	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7601773	0.98[EUR][1000 genomes]
rs7602160	1.00[ASN][1000 genomes]
rs9677607	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)