SNP Report
Basic Infomation
| Name | rs57924547 dbSNP |
|---|---|
| Location | chr:8,130578533 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 31)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10956483 | 0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs10956485 | 0.81[ASN][1000 genomes] |
| rs11785889 | 0.85[ASN][1000 genomes] |
| rs12542190 | 0.94[ASN][1000 genomes] |
| rs12548063 | 0.95[ASN][1000 genomes] |
| rs12677963 | 0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs1433577 | 0.93[ASN][1000 genomes] |
| rs1433580 | 0.84[ASN][1000 genomes] |
| rs1594774 | 0.95[ASN][1000 genomes] |
| rs16904119 | 0.94[ASN][1000 genomes] |
| rs2043404 | 0.91[ASN][1000 genomes] |
| rs2395904 | 0.81[ASN][1000 genomes] |
| rs4319050 | 0.95[ASN][1000 genomes] |
| rs59292525 | 0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs61453473 | 0.95[ASN][1000 genomes] |
| rs6470742 | 0.95[ASN][1000 genomes] |
| rs6982371 | 0.95[ASN][1000 genomes] |
| rs6982553 | 0.95[ASN][1000 genomes] |
| rs7000230 | 0.89[ASN][1000 genomes] |
| rs7000289 | 0.87[ASN][1000 genomes] |
| rs7000320 | 0.95[ASN][1000 genomes] |
| rs7000372 | 0.92[ASN][1000 genomes] |
| rs7006214 | 0.95[ASN][1000 genomes] |
| rs7008811 | 0.85[ASN][1000 genomes] |
| rs7011870 | 0.95[ASN][1000 genomes] |
| rs72609887 | 0.93[ASN][1000 genomes] |
| rs7831493 | 0.88[ASN][1000 genomes] |
| rs7840067 | 0.95[ASN][1000 genomes] |
| rs7840913 | 0.81[ASN][1000 genomes] |
| rs7846327 | 0.95[ASN][1000 genomes] |
| rs9642890 | 0.95[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| CCDC26 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014