SNP Report

Basic Infomation

Name	rs57311037 dbSNP
Location	chr:11,65217626
Allele	T/A

LD-proxy of rSNPs(r²>0.8) (count: 38)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1075692	0.86[ASN][1000 genomes]
rs10896004	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10896005	0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10896006	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10896007	0.84[ASN][1000 genomes]
rs10896008	0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10896009	0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10896010	0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11227196	0.82[AFR][1000 genomes];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11227197	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11227198	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11227199	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11227200	0.82[EUR][1000 genomes]
rs11227201	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11227202	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11227205	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11227206	0.86[ASN][1000 genomes]
rs12269965	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12269975	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12294910	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12360896	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12364730	0.84[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12788055	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12803915	0.86[ASN][1000 genomes]
rs12808303	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17146964	0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2508710	0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs34527830	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs34582634	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs34877911	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35292734	0.84[AFR][1000 genomes];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35469818	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35826299	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3825071	0.84[ASN][1000 genomes]
rs4102217	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7128776	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7931615	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7935551	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000173727	Distal transcriptional regulation
MALAT1	Distal transcriptional regulation
ENSG00000270117	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)