SNP Report

Basic Infomation

Name	rs57107904 dbSNP
Location	chr:1,1044424
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 34)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1105065	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11260592	0.89[AMR][1000 genomes]
rs11260593	0.89[AMR][1000 genomes]
rs11260594	0.85[AMR][1000 genomes]
rs11579922	0.87[AMR][1000 genomes]
rs11581598	0.89[AMR][1000 genomes]
rs11590188	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12726255	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12733365	0.89[AMR][1000 genomes]
rs12743678	0.93[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12754457	0.87[AMR][1000 genomes]
rs4970354	0.89[AMR][1000 genomes]
rs4970355	0.89[AMR][1000 genomes]
rs4970356	0.89[AMR][1000 genomes]
rs4970410	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4970411	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4970412	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs57879151	0.89[AMR][1000 genomes]
rs6604968	0.89[AMR][1000 genomes]
rs6604969	0.87[AMR][1000 genomes]
rs6656379	0.89[AMR][1000 genomes]
rs66622470	0.85[AMR][1000 genomes]
rs6664124	0.89[AMR][1000 genomes]
rs6666280	0.93[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6671356	0.89[AMR][1000 genomes]
rs66868065	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6687681	0.89[AMR][1000 genomes]
rs6697379	0.89[AMR][1000 genomes]
rs6702072	0.89[AMR][1000 genomes]
rs71628940	0.80[ASN][1000 genomes]
rs7518814	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7534657	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7538862	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9329410	0.89[AMR][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)