SNP Report
Name | rs56967344   dbSNP |
---|---|
Location | chr:12,48098876 |
Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs36123489 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs4348981 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs4550297 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs57671593 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs58292976 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs59702452 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs60873325 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7311790 | 0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7315257 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73300653 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73300658 | 0.80[AFR][1000 genomes];0.87[AMR][1000 genomes] |
rs73300663 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73300666 | 0.90[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73300680 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes] |
Symbol | Regulation type |
---|---|
RPAP3 | Proximal transcriptional regulation |
ENSG00000257433 | Proximal transcriptional regulation |
RPAP3 | Distal transcriptional regulation |
SLC48A1 | Distal transcriptional regulation |
RAPGEF3 | Distal transcriptional regulation |
ENSG00000257433 | Distal transcriptional regulation |
ENDOU | Distal transcriptional regulation |
HDAC7 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014