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rVarBase
SNP Report
Basic Infomation
Name
rs56692411  
dbSNP
Location
chr:12,48524870
Allele
A/G
LD-proxy of rSNPs(r
2
>0.8) (count: 9)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs56009798
1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57539024
0.83[AFR][1000 genomes]
rs59233899
0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59896935
0.83[AFR][1000 genomes]
rs60432008
0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74086997
1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74089112
0.83[AFR][1000 genomes]
rs74089122
1.00[AFR][1000 genomes]
rs74089160
0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rSNP related genes
Symbol
Regulation type
PFKM
Distal transcriptional regulation
PFKM
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)