SNP Report
Basic Infomation
| Name | rs56095181 dbSNP |
|---|---|
| Location | chr:14,69212878 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 15)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs12147199 | 0.87[AMR][1000 genomes];0.87[EUR][1000 genomes] |
| rs12148044 | 0.92[AMR][1000 genomes];0.99[EUR][1000 genomes] |
| rs17757282 | 1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes] |
| rs56082161 | 1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
| rs58638884 | 0.87[AMR][1000 genomes];0.88[EUR][1000 genomes] |
| rs72731526 | 1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes] |
| rs72731527 | 1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes] |
| rs72731529 | 1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes] |
| rs72731531 | 0.87[AMR][1000 genomes];0.90[EUR][1000 genomes] |
| rs72731532 | 0.84[AMR][1000 genomes];0.90[EUR][1000 genomes] |
| rs72731535 | 0.84[AMR][1000 genomes];0.88[EUR][1000 genomes] |
| rs72731537 | 0.84[AMR][1000 genomes];0.88[EUR][1000 genomes] |
| rs72731538 | 0.84[AMR][1000 genomes];0.88[EUR][1000 genomes] |
| rs72731539 | 0.87[AMR][1000 genomes];0.88[EUR][1000 genomes] |
| rs735292 | 0.87[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ZFP36L1 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014