SNP Report

Basic Infomation

Name	rs55973213 dbSNP
Location	chr:1,200882238
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 8)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12118246	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12145340	0.94[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs28684993	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs45547233	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs58975754	0.88[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs60257241	0.94[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs61389587	0.95[EUR][1000 genomes]
rs7528977	0.94[AMR][1000 genomes];0.98[ASN][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)