SNP Report

Basic Infomation

Name	rs55900249 dbSNP
Location	chr:1,200998210
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 33)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10920104	1.00[EUR][1000 genomes]
rs11811775	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1536128	1.00[EUR][1000 genomes]
rs16847468	1.00[EUR][1000 genomes]
rs16847518	1.00[EUR][1000 genomes]
rs16847530	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16847659	1.00[EUR][1000 genomes]
rs16847900	1.00[EUR][1000 genomes]
rs16847903	1.00[EUR][1000 genomes]
rs4304621	1.00[EUR][1000 genomes]
rs56403852	1.00[EUR][1000 genomes]
rs58696905	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59587246	1.00[EUR][1000 genomes]
rs60009922	1.00[EUR][1000 genomes]
rs60370353	1.00[EUR][1000 genomes]
rs60533026	1.00[EUR][1000 genomes]
rs60807321	1.00[EUR][1000 genomes]
rs61022937	1.00[EUR][1000 genomes]
rs61238538	1.00[EUR][1000 genomes]
rs61740468	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74136283	1.00[EUR][1000 genomes]
rs74136284	1.00[EUR][1000 genomes]
rs74136298	1.00[EUR][1000 genomes]
rs74136306	1.00[EUR][1000 genomes]
rs74136314	1.00[EUR][1000 genomes]
rs74136316	1.00[EUR][1000 genomes]
rs74136317	1.00[EUR][1000 genomes]
rs74136319	1.00[EUR][1000 genomes]
rs74136323	1.00[EUR][1000 genomes]
rs74138813	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74138814	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7541591	1.00[EUR][1000 genomes]
rs958289	1.00[EUR][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)