SNP Report
Basic Infomation
| Name | rs55779318 dbSNP |
|---|---|
| Location | chr:14,69116860 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 20)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10438159 | 0.81[EUR][1000 genomes] |
| rs11847037 | 0.81[AMR][1000 genomes] |
| rs11848320 | 0.86[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs11850918 | 0.93[AMR][1000 genomes] |
| rs17756651 | 0.84[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs17835116 | 0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs17835200 | 0.98[EUR][1000 genomes] |
| rs2145156 | 0.81[EUR][1000 genomes] |
| rs55877285 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs56070472 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs59978441 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes] |
| rs61987106 | 0.93[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs61987107 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs61987112 | 0.89[AFR][1000 genomes] |
| rs61987114 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs61987115 | 0.87[AFR][1000 genomes] |
| rs61987120 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs61987122 | 0.98[EUR][1000 genomes] |
| rs8009601 | 0.81[EUR][1000 genomes] |
| rs8017092 | 0.81[AMR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| RAD51B | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014