SNP Report
Name | rs529866   dbSNP |
---|---|
Location | chr:16,11373320 |
Allele | C/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs11649073 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes] |
rs12051532 | 0.96[ASN][1000 genomes] |
rs12162021 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes] |
rs12596260 | 0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.96[TSI][hapmap];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs12598646 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.90[ASN][1000 genomes] |
rs12599908 | 1.00[CEU][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs12600282 | 0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap] |
rs12917839 | 0.90[ASN][1000 genomes] |
rs12918017 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes] |
rs12921562 | 0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs12922090 | 1.00[CHB][hapmap];0.87[CHD][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes] |
rs12922409 | 0.90[ASN][1000 genomes] |
rs12922733 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs12924957 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes] |
rs12925649 | 0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs12927773 | 1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.90[ASN][1000 genomes] |
rs12928822 | 1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.90[ASN][1000 genomes] |
rs12928968 | 0.86[ASN][1000 genomes] |
rs12935137 | 0.86[ASN][1000 genomes] |
rs13332454 | 0.97[ASN][1000 genomes] |
rs1345880 | 0.90[ASN][1000 genomes] |
rs1559393 | 1.00[JPT][hapmap];0.96[ASN][1000 genomes] |
rs1646023 | 1.00[ASN][1000 genomes] |
rs1646025 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.83[MKK][hapmap];0.96[TSI][hapmap];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs1646026 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs1690500 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs1794019 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs1794021 | 0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1794022 | 0.82[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.96[TSI][hapmap];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1794024 | 0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs1794025 | 0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs181694 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.96[TSI][hapmap];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs2032933 | 0.94[CEU][hapmap];0.82[CHB][hapmap];0.93[GIH][hapmap];0.92[TSI][hapmap] |
rs2216763 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes] |
rs243315 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.96[TSI][hapmap];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs2867936 | 0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap] |
rs2867937 | 0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs34294744 | 0.90[ASN][1000 genomes] |
rs34437200 | 0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs34787601 | 0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs34832141 | 0.90[ASN][1000 genomes] |
rs34947566 | 0.90[ASN][1000 genomes] |
rs35307035 | 0.90[ASN][1000 genomes] |
rs35342456 | 0.83[ASN][1000 genomes] |
rs3931016 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes] |
rs396263 | 0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs405500 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes] |
rs412861 | 0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs423668 | 0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs423674 | 1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4238604 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes] |
rs425537 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes] |
rs430966 | 0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs441349 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs443299 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4781056 | 0.86[ASN][1000 genomes] |
rs497184 | 1.00[CEU][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs55752638 | 0.90[ASN][1000 genomes] |
rs60409583 | 0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs62023605 | 0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs62023624 | 0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs6498184 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
rs66718203 | 0.80[ASN][1000 genomes] |
rs7184969 | 0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs7191700 | 1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes] |
rs7197188 | 0.94[CEU][hapmap];0.82[CHB][hapmap];0.93[GIH][hapmap];0.92[TSI][hapmap] |
rs7203508 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
rs72773819 | 0.90[ASN][1000 genomes] |
rs731774 | 0.83[CEU][hapmap] |
rs8044747 | 0.97[ASN][1000 genomes] |
rs8050084 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes] |
rs9932855 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes] |
rs9939877 | 0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
PRM2 | Proximal transcriptional regulation |
RMI2 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014