SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 6)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12481717	0.90[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs1407256	0.90[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4911248	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4911250	0.86[JPT][hapmap]
rs6141768	0.82[JPT][hapmap]
rs6141769	0.86[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
ENSG00000228156	Distal transcriptional regulation
C20orf112	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 2)

eQTL related gene	Source
C20orf203	SCAN
PXMP4	SCAN