SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10878035	1.00[YRI][hapmap]
rs12322131	1.00[YRI][hapmap]
rs1482283	0.80[EUR][1000 genomes]
rs515205	0.92[ASW][hapmap];0.95[CEU][hapmap];0.91[CHB][hapmap];0.92[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.88[MKK][hapmap];0.93[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs520138	0.80[EUR][1000 genomes]
rs532802	0.95[CEU][hapmap];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs549727	0.80[EUR][1000 genomes]
rs551739	1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs556141	1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs556227	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs567779	0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7974495	1.00[YRI][hapmap]

rSNP related genes

Symbol	Regulation type
SLC2A13	Distal transcriptional regulation
SLC2A13	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)