SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10438539	0.84[ASN][1000 genomes]
rs12445628	1.00[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs2052592	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3760114	1.00[CEU][hapmap];0.81[AMR][1000 genomes]
rs3973550	0.95[AMR][1000 genomes]
rs4780360	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs57020779	0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7194175	1.00[CEU][hapmap]
rs8045556	1.00[CEU][hapmap];1.00[YRI][hapmap];0.93[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs8054781	1.00[CEU][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9673278	0.90[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
SOCS1	Distal transcriptional regulation
ENSG00000238409	Distal transcriptional regulation
RMI2	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)