SNP Report
| Name | rs45517843   dbSNP |
|---|---|
| Location | chr:9,139339595 |
| Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11555399 | 0.91[AFR][1000 genomes] |
| rs41306736 | 0.94[AFR][1000 genomes] |
| rs45509099 | 0.94[AFR][1000 genomes] |
| rs45542334 | 0.91[AFR][1000 genomes] |
| rs45568431 | 0.91[AFR][1000 genomes] |
| rs57380853 | 0.86[AFR][1000 genomes] |
| rs57479787 | 0.94[AFR][1000 genomes] |
| rs59410427 | 0.89[AFR][1000 genomes] |
| rs59966630 | 0.94[AFR][1000 genomes] |
| rs60316819 | 0.94[AFR][1000 genomes] |
| rs60910521 | 0.94[AFR][1000 genomes] |
| rs6560631 | 0.94[AFR][1000 genomes] |
| rs7022785 | 0.84[AFR][1000 genomes] |
| rs7854648 | 0.94[AFR][1000 genomes] |
| rs7855912 | 0.94[AFR][1000 genomes] |
| rs7861550 | 0.94[AFR][1000 genomes] |
| rs7861813 | 0.94[AFR][1000 genomes] |
| rs7865065 | 0.91[AFR][1000 genomes] |
| Symbol | Regulation type |
|---|---|
| SEC16A | Proximal transcriptional regulation |
| SEC16A | Distal transcriptional regulation |
| C9orf163 | Distal transcriptional regulation |
| SEC16A | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014




