SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1211783	1.00[YRI][hapmap]
rs161053	1.00[ASW][hapmap];0.82[YRI][hapmap]
rs224174	1.00[ASW][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2873628	1.00[AMR][1000 genomes]
rs2957207	1.00[MEX][hapmap]
rs320110	1.00[MEX][hapmap]
rs320127	1.00[ASW][hapmap]
rs368421	1.00[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs3802940	1.00[MEX][hapmap]
rs497037	1.00[ASW][hapmap]
rs4980510	1.00[ASW][hapmap]
rs7111805	1.00[CEU][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs9326429	1.00[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
RCOR2	Proximal transcriptional regulation
NAA40	Distal transcriptional regulation
RCOR2	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)