SNP Report
Basic Infomation
| Name | rs4369449 dbSNP |
|---|---|
| Location | chr:12,48814369 |
| Allele | C/T |
LD-proxy of rSNPs(r2>0.8) (count: 9)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs2705124 | 0.90[CHB][hapmap];0.85[JPT][hapmap] |
| rs2705125 | 0.89[CHB][hapmap];0.85[JPT][hapmap] |
| rs2731063 | 0.90[CHB][hapmap];0.85[JPT][hapmap] |
| rs2731092 | 0.80[CHB][hapmap] |
| rs2731096 | 0.90[CHB][hapmap];0.85[JPT][hapmap] |
| rs2731105 | 0.90[CHB][hapmap];0.85[JPT][hapmap] |
| rs4362184 | 0.80[AMR][1000 genomes];0.86[EUR][1000 genomes] |
| rs7139348 | 0.80[CHB][hapmap] |
| rs7309958 | 0.90[CHB][hapmap];0.85[JPT][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ZNF641 | Distal transcriptional regulation |
| ENSG00000257735 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 6)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014