SNP Report

Basic Infomation

Name	rs430827 dbSNP
Location	chr:5,96331371
Allele	A/C

LD-proxy of rSNPs(r²>0.8) (count: 45)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10038651	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10044354	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10476696	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs13358339	0.81[EUR][1000 genomes]
rs1363974	0.80[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1423357	0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs18059	0.84[ASN][1000 genomes]
rs2161548	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2351010	0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs27289	0.84[AFR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs27290	0.82[AFR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs27293	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs27294	0.84[ASN][1000 genomes]
rs27295	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs27296	0.82[ASN][1000 genomes]
rs27298	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs27299	0.82[ASN][1000 genomes]
rs27300	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs27306	0.83[EUR][1000 genomes]
rs27307	0.83[EUR][1000 genomes]
rs27436	0.89[AFR][1000 genomes];0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs27613	0.86[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs27621	0.82[ASN][1000 genomes]
rs27659	0.87[AFR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs27660	0.82[EUR][1000 genomes]
rs27711	0.82[EUR][1000 genomes]
rs27993	0.82[EUR][1000 genomes]
rs27998	0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs31398	0.82[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs3797796	0.83[ASN][1000 genomes]
rs38029	0.82[EUR][1000 genomes]
rs38031	0.82[EUR][1000 genomes]
rs38033	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs38034	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs38038	0.89[AFR][1000 genomes];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs38039	0.82[EUR][1000 genomes]
rs38040	0.88[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs38043	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs38044	0.88[AFR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3909451	0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs39602	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs42983	0.84[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs4360063	0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7716222	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9314181	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
LNPEP	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)