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rVarBase
SNP Report
Basic Infomation
Name
rs3897565  
dbSNP
Location
chr:11,63818680
Allele
G/C
LD-proxy of rSNPs(r
2
>0.8) (count: 11)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs2154977
1.00[EUR][1000 genomes]
rs2302262
1.00[EUR][1000 genomes]
rs320134
1.00[EUR][1000 genomes]
rs320135
1.00[EUR][1000 genomes]
rs320136
1.00[EUR][1000 genomes]
rs531658
1.00[EUR][1000 genomes]
rs59863478
1.00[EUR][1000 genomes]
rs61431997
1.00[EUR][1000 genomes]
rs73498137
1.00[EUR][1000 genomes]
rs73498145
1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs747621
1.00[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
MACROD1
RNA binding protein mediated regulation
ENSG00000256824
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)