SNP Report
Basic Infomation
| Name | rs383721 dbSNP |
|---|---|
| Location | chr:14,69178795 |
| Allele | C/A |
LD-proxy of rSNPs(r2>0.8) (count: 15)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs1034485 | 0.94[CEU][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes] |
| rs11158760 | 0.94[CEU][hapmap] |
| rs168964 | 0.89[CEU][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes] |
| rs194773 | 0.89[CEU][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes] |
| rs194781 | 0.94[CEU][hapmap];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes] |
| rs194782 | 0.94[CEU][hapmap];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes] |
| rs381336 | 0.89[CEU][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes] |
| rs387618 | 0.94[AMR][1000 genomes];0.96[EUR][1000 genomes] |
| rs404539 | 0.83[CEU][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes] |
| rs405329 | 0.94[CEU][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes] |
| rs408608 | 0.92[AMR][1000 genomes];0.97[EUR][1000 genomes] |
| rs409633 | 0.89[CEU][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes] |
| rs412016 | 0.94[CEU][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes] |
| rs440489 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes] |
| rs444883 | 0.94[CEU][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ZFP36L1 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014