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rVarBase
SNP Report
Basic Infomation
Name
rs3789612  
dbSNP
Location
chr:1,114414108
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 2)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs2358816
1.00[YRI][hapmap]
rs36052758
1.00[YRI][hapmap]
rSNP related genes
Symbol
Regulation type
AP4B1-AS1
RNA binding protein mediated regulation
PTPN22
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)