SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 8)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11755527	1.00[ASW][hapmap];0.89[CEU][hapmap];0.80[CHD][hapmap];0.95[GIH][hapmap];0.91[JPT][hapmap];1.00[LWK][hapmap];0.87[MEX][hapmap];0.98[MKK][hapmap];0.89[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12209546	0.82[CEU][hapmap];0.85[CHD][hapmap]
rs206916	0.83[CHD][hapmap]
rs2501720	0.83[CHD][hapmap]
rs4706358	0.82[CEU][hapmap]
rs4707605	0.85[CHD][hapmap]
rs9344992	0.82[JPT][hapmap]
rs943689	0.82[YRI][hapmap]

rSNP related genes

Symbol	Regulation type
BACH2	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 2)

eQTL related gene	Source
GABRR2	SCAN
SPINK2	SCAN