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rVarBase
SNP Report
Basic Infomation
Name
rs3741624  
dbSNP
Location
chr:12,49432263
Allele
G/T
LD-proxy of rSNPs(r
2
>0.8) (count: 11)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10459219
1.00[LWK][hapmap]
rs11610308
1.00[CHB][hapmap]
rs11833860
1.00[CHB][hapmap];1.00[MEX][hapmap]
rs12318558
1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12321484
1.00[LWK][hapmap];1.00[MEX][hapmap]
rs12424638
1.00[CHB][hapmap]
rs12809774
1.00[LWK][hapmap]
rs2024
1.00[LWK][hapmap]
rs7311091
1.00[JPT][hapmap]
rs833823
1.00[CHB][hapmap]
rs833836
1.00[JPT][hapmap]
rSNP related genes
Symbol
Regulation type
MLL2
Proximal transcriptional regulation
TUBA1B
Distal transcriptional regulation
ENSG00000258017
Distal transcriptional regulation
PRKAG1
Distal transcriptional regulation
MLL2
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)