SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 24)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10052046	0.83[ASN][1000 genomes]
rs10075459	0.87[ASN][1000 genomes]
rs10076758	0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10478998	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12653783	0.83[ASN][1000 genomes]
rs12657965	0.83[ASN][1000 genomes]
rs2278398	0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2301579	0.83[ASN][1000 genomes]
rs28833517	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2897096	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35696821	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3749756	0.87[ASN][1000 genomes]
rs3792894	0.83[ASN][1000 genomes]
rs3805681	0.83[ASN][1000 genomes]
rs3805683	0.87[ASN][1000 genomes]
rs3828675	0.87[ASN][1000 genomes]
rs4361509	0.87[ASN][1000 genomes]
rs6596070	0.83[ASN][1000 genomes]
rs6896703	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs715285	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7701237	0.87[ASN][1000 genomes]
rs7703009	0.87[ASN][1000 genomes]
rs7733502	0.81[ASN][1000 genomes]
rs7733814	0.82[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CT62	Distal transcriptional regulation
LRRC49	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)