SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 22)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10036208	0.99[ASN][1000 genomes]
rs10051679	1.00[ASN][1000 genomes]
rs10060025	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10067082	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11741341	1.00[ASN][1000 genomes]
rs12055301	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13190293	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1473072	0.95[ASN][1000 genomes]
rs162902	0.81[ASN][1000 genomes]
rs162907	0.93[ASN][1000 genomes]
rs2077380	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2405271	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs371709	0.92[ASN][1000 genomes]
rs381870	0.81[EUR][1000 genomes]
rs4535443	0.97[ASN][1000 genomes]
rs60168911	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6875603	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs733300	0.97[ASN][1000 genomes]
rs743563	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs81598	0.91[ASN][1000 genomes]
rs907368	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9791170	1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
P4HA2	Proximal transcriptional regulation
P4HA2	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)