SNP Report
Name | rs28667882   dbSNP |
---|---|
Location | chr:5,131568113 |
Allele | C/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10036208 | 0.99[ASN][1000 genomes] |
rs10051679 | 1.00[ASN][1000 genomes] |
rs10060025 | 0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs10067082 | 0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs11741341 | 1.00[ASN][1000 genomes] |
rs12055301 | 0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs13190293 | 1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs1473072 | 0.95[ASN][1000 genomes] |
rs162902 | 0.81[ASN][1000 genomes] |
rs162907 | 0.93[ASN][1000 genomes] |
rs2077380 | 0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs2405271 | 0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs371709 | 0.92[ASN][1000 genomes] |
rs381870 | 0.81[EUR][1000 genomes] |
rs4535443 | 0.97[ASN][1000 genomes] |
rs60168911 | 0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6875603 | 0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs733300 | 0.97[ASN][1000 genomes] |
rs743563 | 0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs81598 | 0.91[ASN][1000 genomes] |
rs907368 | 0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs9791170 | 1.00[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
P4HA2 | Proximal transcriptional regulation |
P4HA2 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014