SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 20)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs151928	0.94[CEU][hapmap]
rs18036	0.94[CEU][hapmap];0.83[CHB][hapmap];0.82[JPT][hapmap];0.95[YRI][hapmap];0.97[AFR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs245478	0.95[CEU][hapmap];0.84[CHB][hapmap];0.83[JPT][hapmap];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs26613	0.89[CEU][hapmap];0.82[CHB][hapmap];0.82[EUR][1000 genomes]
rs26614	0.82[EUR][1000 genomes]
rs26615	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs26616	0.95[CEU][hapmap];0.84[CHB][hapmap]
rs26617	0.90[CEU][hapmap];0.84[CHB][hapmap];0.81[EUR][1000 genomes]
rs26618	0.94[CEU][hapmap];0.83[CHB][hapmap];0.81[EUR][1000 genomes]
rs26652	0.94[CEU][hapmap];0.83[CHB][hapmap];0.83[EUR][1000 genomes]
rs26657	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs27543	0.90[CEU][hapmap];0.82[EUR][1000 genomes]
rs27778	0.85[EUR][1000 genomes]
rs28048	0.82[EUR][1000 genomes]
rs28049	0.83[EUR][1000 genomes]
rs28050	0.94[CEU][hapmap];0.83[CHB][hapmap];0.82[JPT][hapmap];0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs34758	0.87[CHB][hapmap];0.95[AFR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs41135	0.94[JPT][hapmap]
rs469736	0.85[CEU][hapmap]
rs469876	0.94[CEU][hapmap]

rSNP related genes

Symbol	Regulation type
ERAP1	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)