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rVarBase
SNP Report
Basic Infomation
Name
rs266274  
dbSNP
Location
chr:15,67287430
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 2)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs12904969
1.00[CHB][hapmap];0.87[CHD][hapmap];0.97[GIH][hapmap];0.94[JPT][hapmap];0.90[ASN][1000 genomes]
rs171957
0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
ENSG00000259347
Proximal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 2)
eQTL related gene
Source
ABI1
SCAN
C2orf70
SCAN