SNP Report
Name | rs2501721 dbSNP |
---|---|
Location | chr:6,90845036 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs207254 | 0.88[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs207255 | 0.88[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs207256 | 0.88[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs207259 | 0.96[CEU][hapmap];1.00[CHB][hapmap];0.83[JPT][hapmap];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs207261 | 0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs207262 | 0.96[CEU][hapmap];1.00[CHB][hapmap];0.83[JPT][hapmap];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs207263 | 0.91[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs207264 | 0.83[TSI][hapmap] |
rs207267 | 0.91[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs207268 | 0.92[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.86[GIH][hapmap];0.83[JPT][hapmap];0.89[MEX][hapmap];0.98[TSI][hapmap];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs207269 | 0.96[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.86[GIH][hapmap];0.83[JPT][hapmap];0.90[MEX][hapmap];0.98[TSI][hapmap];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs207270 | 0.83[TSI][hapmap] |
rs207271 | 0.91[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs207272 | 0.96[CEU][hapmap];1.00[CHB][hapmap];0.83[JPT][hapmap];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs207273 | 0.96[CEU][hapmap];1.00[CHB][hapmap];0.83[JPT][hapmap];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs207274 | 0.90[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs207275 | 0.90[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs207276 | 0.90[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs207277 | 0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
BACH2 | RNA binding protein mediated regulation |
Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL related gene | Source |
---|---|
LIPG | SCAN |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014