SNP Report
| Name | rs2325785   dbSNP |
|---|---|
| Location | chr:11,63920689 |
| Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs2246552 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs2254599 | 0.83[AFR][1000 genomes];0.85[AMR][1000 genomes] |
| rs2254709 | 0.83[AFR][1000 genomes];0.85[AMR][1000 genomes] |
| rs2515239 | 1.00[AMR][1000 genomes] |
| rs2622413 | 0.87[AMR][1000 genomes] |
| rs2622414 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs2622415 | 0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs2622416 | 0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs2622421 | 1.00[AMR][1000 genomes] |
| rs2622423 | 0.81[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs2622431 | 0.85[AMR][1000 genomes] |
| rs2701525 | 1.00[AMR][1000 genomes] |
| rs2701526 | 1.00[AMR][1000 genomes] |
| rs2701528 | 1.00[AMR][1000 genomes] |
| rs2701529 | 0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs2701532 | 1.00[AMR][1000 genomes] |
| rs2701535 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs2701538 | 0.90[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs2845587 | 1.00[AMR][1000 genomes] |
| rs2845589 | 1.00[AMR][1000 genomes] |
| rs2845591 | 0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs2845595 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs2845598 | 1.00[AMR][1000 genomes] |
| rs4980526 | 1.00[AMR][1000 genomes] |
| rs60647009 | 1.00[AMR][1000 genomes] |
| Symbol | Regulation type |
|---|---|
| ENSG00000256824 | Distal transcriptional regulation |
| MACROD1 | Distal transcriptional regulation |
| OTUB1 | Distal transcriptional regulation |
| STIP1 | Distal transcriptional regulation |
| ENSG00000256940 | Distal transcriptional regulation |
| PPP1R14B | Distal transcriptional regulation |
| MACROD1 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014




