SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1406827	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1537028	0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1569722	0.93[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2425753	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs3091794	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4812991	0.98[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4812992	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6032644	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6074015	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
SLC12A5	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)