SNP Report

Basic Infomation

Name	rs2279990 dbSNP
Location	chr:2,28636740
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12624279	0.88[CEU][hapmap];0.85[EUR][1000 genomes]
rs4426489	0.80[CEU][hapmap];0.84[EUR][1000 genomes]
rs4666070	0.82[EUR][1000 genomes]
rs4666072	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6547850	0.84[CEU][hapmap]
rs6547851	0.84[CEU][hapmap]
rs7562	0.89[CEU][hapmap]
rs7606480	0.88[CEU][hapmap];0.84[EUR][1000 genomes]
rs9309662	0.88[CEU][hapmap]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 4)