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rVarBase
SNP Report
Basic Infomation
Name
rs2270206  
dbSNP
Location
chr:7,116913567
Allele
C/A
LD-proxy of rSNPs(r
2
>0.8) (count: 13)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10235008
0.94[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs10241082
0.86[AFR][1000 genomes]
rs10262178
0.86[AFR][1000 genomes]
rs10272540
0.89[AFR][1000 genomes]
rs2106894
0.89[AFR][1000 genomes]
rs4403349
0.87[AFR][1000 genomes]
rs55712256
0.86[AFR][1000 genomes]
rs57237256
0.85[AFR][1000 genomes]
rs59383324
0.89[AFR][1000 genomes]
rs59522753
0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs718737
0.89[AFR][1000 genomes]
rs7786419
0.95[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs9918524
0.89[AFR][1000 genomes]
rSNP related genes
Symbol
Regulation type
TES
Distal transcriptional regulation
ST7
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)