SNP Report
Basic Infomation
| Name | rs2244625 dbSNP |
|---|---|
| Location | chr:11,64026144 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 3)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs510372 | 0.81[ASW][hapmap];0.90[YRI][hapmap] |
| rs588177 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs685870 | 0.92[CEU][hapmap];0.80[MEX][hapmap];0.81[TSI][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| PLCB3 | Proximal transcriptional regulation |
| PLCB3 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 15)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014